A single-embryo, single-cell time-resolved
model for mouse gastrulation

Markus Mittnenzweig, Yoav Mayshar, Saifeng Cheng, Raz Ben-Yair, Ron Hadas, Yoach Rais, Elad Chomsky, Netta Reines, Anna Uzonyi, Lior Lumerman, Aviezer Lifshitz, Zohar Mukamel, Ayelet-Hashahar Orenbuch, Amos Tanay, Yonatan Stelzer, A single-embryo, single-cell time-resolved model for mouse gastrulation, Cell, Volume 184, Issue 11, 2021, Pages 2825-2842.e22, ISSN 0092-8674

Transcriptome dynamics of CD4+ T cells during malaria maps gradual transit from effector to memory

Soon, M.S.F., Lee, H.J., Engel, J.A. et al. Transcriptome dynamics of CD4+ T cells during malaria maps gradual transit from effector to memory. Nat Immunol 21, 1597–1610 (2020).

A targeted amplicon sequencing panel to simultaneously identify mosquito species and Plasmodium presence across the entire Anopheles genus

Makunin A, Korlević P, Park N, Goodwin S, Waterhouse RM, von Wyschetzki K, Jacob CG, Davies R, Kwiatkowski D, St Laurent B, Ayala D, Lawniczak MKN. A targeted amplicon sequencing panel to simultaneously identify mosquito species and Plasmodium presence across the entire Anopheles genus. Mol Ecol Resour. 2022 Jan;22(1):28-44. doi: 10.1111/1755-0998.13436. Epub 2021 Jun 19. PMID: 34053186; PMCID: PMC7612955.

Single-cell Ribo-seq reveals cell cycle-dependent translational pausing

VanInsberghe, M., van den Berg, J., Andersson-Rolf, A. et al. Single-cell Ribo-seq reveals cell cycle-dependent translational pausing. Nature 597, 561–565 (2021). https://doi.org/10.1038/s41586-021-03887-4

3'-DGE High Throughput RNA Library Preparation V.2

Sarah Boswell, Caitlin Mills, Feodor Price, Stewart Rudnicki 2021. 3'-DGE High Throughput RNA Library Preparation. protocols.io

BioSamples Database: An Updated Sample Metadata Hub

Mélanie Courtot, Luca Cherubin, Adam Faulconbridge, Daniel Vaughan, Matthew Green, David Richardson, Peter Harrison, Patricia L Whetzel, Helen Parkinson, Tony Burdett; BioSamples database: an updated sample metadata hub, Nucleic Acids Research, Volume 47, Issue D1, 8 January 2019, Pages D1172–D1178, https://doi.org/10.1093/nar/gky1061

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